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rGREAT (version 1.4.2)
Client for GREAT Analysis
Description
This package makes GREAT (Genomic Regions Enrichment of Annotations Tool) analysis automatic by constructing a HTTP POST request according to user's input and automatically retrieving results from GREAT web server.
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Version
1.4.2
1.4.0
1.2.0
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Version
1.4.2
License
GPL (>= 2)
Issues
15
Pull Requests
0
Stars
76
Forks
11
Repository
https://github.com/jokergoo/rGREAT
Maintainer
Zuguang Gu
Last Published
April 12th, 2016
Functions in rGREAT (1.4.2)
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plotRegionGeneAssociationGraphs-GreatJob-method
Plot region-gene association figures
getEnrichmentTables-GreatJob-method
Get enrichment tables from GREAT web server
availableOntologies-GreatJob-method
All available ontology names
availableCategories-GreatJob-method
Available ontology categories
GreatJob-class
Class to store and retrieve GREAT results
submitGreatJob
Send requests to GREAT web server