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rJPSGCS (version 0.2-7)

R-interface to Gene Drop Simulation from JPSGCS

Description

R-interface to gene drop programs from Alun Thomas' Java Programs for Statistical Genetics and Computational Statistics (JPSGCS)

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Version

Install

install.packages('rJPSGCS')

Monthly Downloads

2

Version

0.2-7

License

GPL-3

Maintainer

Brad McNeney

Last Published

December 8th, 2014

Functions in rJPSGCS (0.2-7)

rJPSGCS-package

R wrappers for JPSGCS gene drop programs.
FitGMLD

estimate a graphical model for linkage disequilibrium
write.pedfile

write a snp.matrix object to a LINKAGE pedigree file.
write.parfile

write a LINKAGE parameter file
exdat

example data for rJPSGCS
read.pedfile

read a LINKAGE pedigree file into a snp.matrix object
GeneDrops

simulate genotypes on a pedigree