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racir

The goal of racir is to provide fast and easy analysis of rapid A/Ci response (RACiR TM) data obtained using the LI-COR 6800 portable photosynthesis machine (LI-COR Biosciences, Lincoln, NB).

RACiR is a trademark of LI-COR Biosciences, and used with permission.

Please report bugs or suggest features to Dr. Joseph Ronald Stinziano at josephstinziano@gmail.com.

##Contents *read_6800() reads in a tab-delimited LI-COR 6800 file. *racircalcheck() allows the user to run QAQC on the calibration RACiR data. *racircal() calibrates one RACiR leaf data frame based on a calibration data frame. *racircalbatch() calibrates multiple RACiR leaf data frames based on a single calibration data frame.

##Notes & Help For use on rapid A/Ci response data from other instruments, simply modify the varnames variable. Please contact Dr. Joseph R. Stinziano for more information.

Installation

To install the development version, use the following commands. Windows users must have Rtools installed.

library(devtools) install_github("jstinzi/racir")

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Install

install.packages('racir')

Monthly Downloads

176

Version

2.0.0

License

MIT + file LICENSE

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Maintainer

Joseph Stinziano

Last Published

August 3rd, 2020

Functions in racir (2.0.0)

racircalbatch_advanced

Corrects a batch of rapid A/Ci response (RACiR) data
racircalbatch

Corrects a batch of rapid A/Ci response (RACiR) data
racircalcheck

Allows visual checking of rapid A/Ci response (RACiR) calibration data using empty chamber data.
racircalcheck_advanced

Allows visual checking of rapid A/Ci response (RACiR) calibration data using empty chamber data.
racircal

Corrects rapid A/Ci response (RACiR) data from leaves using empty chamber data.
read_6800

Reads files from the Li-Cor 6800
racircal_advanced

Corrects rapid A/Ci response (RACiR) data from leaves using empty chamber data.