repfdr (version 1.0)

zmat: Three GWAS studies

Description

The data of the three studies was simulated with HAPGEN2 and a sample of it was taken (Chromosomes 1 to 4) for the examples. The data is summarized as z-scores (transformed p-values, with inverse standard normal cumulative distribution).

Usage

data(zmat)

format

Matrix of 249024 SNPs' z-scores (in rows) in each of the 3 studies (columns).

source

See: Su, Zhan, Jonathan Marchini, and Peter Donnelly. "HAPGEN2: simulation of multiple disease SNPs." Bioinformatics 27.16 (2011): 2304-2305.

Examples

data(zmat)