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rgbif (version 0.3.0)
Interface to the Global Biodiversity Information Facility API methods
Description
A programmatic interface to the Web Service methods provided by the Global Biodiversity Information Facility.
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Install
install.packages('rgbif')
Monthly Downloads
6,082
Version
0.3.0
License
CC0
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40
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169
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Repository
https://github.com/ropensci/rgbif
Maintainer
Scott Chamberlain
Last Published
July 19th, 2013
Functions in rgbif (0.3.0)
Search all functions
gbifdata.gbifdens
Gbifdens method
colClasses
Coerces data.frame columns to the specified classes
densitylist
The density web service provides access to records showing the density of occurrence records from the GBIF Network by one-degree cell.
blanktheme
Custom ggplot2 theme
gbifmap_dens
Make a simple map to visualize GBIF data density data
country_codes
Look up 2 character ISO country codes
density_spplist
The density web service provides access to records showing the density of occurrence records from the GBIF Network by one-degree cell.
capwords
Capitalize the first letter of a character string.
commas_to_periods
Convert commas to periods in lat/long data
gbifdata.gbiflist
Gbiflist method
gbifdata
Get data.frame from occurrencelist, occurrencelist_many, or densitylist.
print.gbiflist
Print summary of gbiflist class
togeojson
Convert spatial data files to GeoJSON from various formats.
is.gbiflist
Check if object is of class gbiflist
taxonsearch
Search for taxa in GBIF.
occurrencedensity
Returns summary counts of occurrence records by one-degree cell for a single taxon, country, dataset, data publisher or data network.
stylegeojson
Style a data.frame prior to converting to geojson.
taxrank
Get the possible values to be used for (taxonomic) rank arguments in GBIF API methods.
occurrencelist_many
occurrencelist_many is the same as occurrencelist, but takes in a vector of species names.
is.gbifdens
Check if object is of class gbifdens
taxonget
Get taxonomic information on a specific taxon or taxa in GBIF by their taxon concept keys.
providers
Get data providers and their unique keys.
networks
Get data networks and their unique keys.
occurrencecount
Counts taxon concept records matching a range of filters.
occurrenceget
Get individual records for a given occurrence record.
print.gbifdens
Print summary of gbifdens class
occurrencelist
Occurrencelist searches for taxon concept records matching a range of filters.
resources
Get data resources and their unique keys.
gbifmap_list
Make a simple map to visualize GBIF point data.
parseresults
Parse results from call to occurrencelist endpoint
gbifxmlToDataFrame
Code based on the `gbifxmlToDataFrame` function from dismo package (http://cran.r-project.org/web/packages/dismo/index.html), by Robert Hijmans, 2012-05-31, License: GPL v3
isocodes
Lookup-table for 2 character country ISO codes
taxoncount
Search by taxon to retrieve number of records in GBIF.