rphast (version 1.1)

isSubstMod.tm: Check Substitution Model Strings

Description

Check if a string represents a phast substitution model

Usage

isSubstMod.tm(mod)

Arguments

mod

A vector of character strings representing substitution model names to be tested

Value

• A vector of logical values indicating whether each string represents a defined substitution model

Examples

isSubstMod.tm(c("JC69", "K80", "F81", "HKY85", "HKY85+Gap",
                "REV", "SSREV", "REV+GC", "UNREST", "R2", "U2", "R2S",
                "U2S", "R3", "R3S", "U3", "U3S", "GC", "HB",
                "bad.model"))