run.jagsfile

run.JAGSfile

autorun.jagsfile

autorun.JAGSfile

xgrid.autorun.jagsfile

xgrid.autorun.JAGSfile

xgrid.run.jagsfile

xgrid.run.JAGSfile

xgrid.submit.jagsfile

xgrid.submit.JAGSfile

These functions are deprecated and only remain for backwards compatibility.  
Please use the run.jags or autorun.jags functions directly, with the model argument replacing path.

models

This package provides high-level interface utilities for Just Another Gibbs Sampler (JAGS).  The primary functions facilitate running parallel JAGS models for multiple chains, automated control of convergence and sample length diagnostics, evaluation of the performance of a model against simulated data, and compatibility with the WinBUGS syntax of model files with data and initial values lists.  Model fitting can be done locally (via the rjags package or separate JAGS instances) or via distributed computing clusters such as those provided by snow (a Simple Network Of Workstations), Xgrid, or other user specified functions.  A JAGS extension module implementing additional distributions for JAGS models (including the Pareto family of distributions) is also provided.

Matthew Denwood

runjags

Interface utilities, parallel computing methods and additional
        distributions for MCMC models in JAGS

run.jagsfile function

Deprecated functions

run.jagsfile: Deprecated functions

Description

Arguments

See Also