scBio v0.1.0


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Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data

Cellular population mapping (CPM) a deconvolution algorithm in which single-cell genomics is required in only one or a few samples, where in other samples of the same tissue, only bulk genomics is measured and the underlying fine resolution cellular heterogeneity is inferred.

Functions in scBio

Name Description
SCCellSpace Single-cell cell space.
SCLabels Single-cell classification into cell types.
SCFlu Gene expression profiles of lung cells after influenza infection.
CPM The Cellular Population Mapping (CPM) algorithm.
BulkFlu Gene expression profiles of flu and pbs sample.
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Type Package
License GPL-2
Encoding UTF-8
LazyData true
RoxygenNote 6.1.0
biocViews limma
NeedsCompilation no
Packaged 2018-08-02 18:32:24 UTC; IritGNB5
Repository CRAN
Date/Publication 2018-08-07 19:40:06 UTC

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