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scBio (version 0.1.0)

Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data

Description

Cellular population mapping (CPM) a deconvolution algorithm in which single-cell genomics is required in only one or a few samples, where in other samples of the same tissue, only bulk genomics is measured and the underlying fine resolution cellular heterogeneity is inferred.

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Version

Install

install.packages('scBio')

Monthly Downloads

196

Version

0.1.0

License

GPL-2

Maintainer

Amit Frishberg

Last Published

August 7th, 2018

Functions in scBio (0.1.0)

SCCellSpace

Single-cell cell space.
SCLabels

Single-cell classification into cell types.
SCFlu

Gene expression profiles of lung cells after influenza infection.
CPM

The Cellular Population Mapping (CPM) algorithm.
BulkFlu

Gene expression profiles of flu and pbs sample.