scBio v0.1.0
0
Monthly downloads
Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data
Cellular population mapping (CPM) a deconvolution algorithm in which single-cell genomics is required in only one or a few samples, where in other samples of the same tissue, only bulk genomics is measured and the underlying fine resolution cellular heterogeneity is inferred.
Functions in scBio
| Name | Description | |
| SCCellSpace | Single-cell cell space. | |
| SCLabels | Single-cell classification into cell types. | |
| SCFlu | Gene expression profiles of lung cells after influenza infection. | |
| CPM | The Cellular Population Mapping (CPM) algorithm. | |
| BulkFlu | Gene expression profiles of flu and pbs sample. | |
| No Results! | ||
Last month downloads
Details
| Type | Package |
| License | GPL-2 |
| Encoding | UTF-8 |
| LazyData | true |
| RoxygenNote | 6.1.0 |
| biocViews | limma |
| NeedsCompilation | no |
| Packaged | 2018-08-02 18:32:24 UTC; IritGNB5 |
| Repository | CRAN |
| Date/Publication | 2018-08-07 19:40:06 UTC |
| imports | doSNOW , fields , foreach , LiblineaR , limma , parallel , raster , sp |
| depends | R (>= 2.10) |
| Contributors | Amit Frishberg, Naama Peshes-Yaloz, Irit Gat-Viks |
Include our badge in your README
[](http://www.rdocumentation.org/packages/scBio)
