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scatterbar

scatterbar is an open-source R package for displaying proportional data across spatially resolved contexts. This is the scatterbar R documentation website. Questions, suggestions, or problems should be submitted as GitHub issues.

Overview

By combining the concepts of scatter plots and stacked bar charts, scatterbar allows users to visualize variations in proportional data data and compare across different spatial locations.

Installation

To install scatterbarfrom GitHub, we recommend using remotes:

require(remotes)
remotes::install_github('JEFworks-Lab/scatterbar')

Tutorials

Citation

Our preprint describing scatterbar is available on bioRxiv:

Velazquez D. et al. (2024), "scatterbar: an R package for visualizing proportional data across spatially resolved coordinates", bioRxiv

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Version

Install

install.packages('scatterbar')

Monthly Downloads

185

Version

0.1.0

License

GPL-3

Issues

Pull Requests

Stars

Forks

Maintainer

Dee Velazquez

Last Published

November 25th, 2024

Functions in scatterbar (0.1.0)

mOB

Deconvolved cell-type proportions from STdeconvolve for a Spatial Transcriptomic dataset of the mouse olfactory bulb along with the positions of their respective spots
scatterbar

Create a scattered stacked bar chart plot
adult_mouse_brain_ffpe

Deconvolved cell-type proportions from STdeconvolve for a Visium data from the adult mouse brain along with the positions of their respective spots