sdef (version 1.7)

Liver.Muscle: Diabetes susceptibility in liver and skeletal muscle of mice.

Description

This dataset contains two lists of p-values obtained from a publicly available experiment to evaluate differential expression between diabetes susceptibility in liver and skeletal muscle of obese and normal mice.

Usage

data(Liver.Muscle)

Format

The format is: a matrix with 2912 rows and two columns. For each gene (row) it reports the p-values of being differentially expressed between obese and normal mice for the two tissues (columns).

References

Lan H, Rabaglia ME, Stoehr JP, Nadler ST et al. Gene expression profiles of non diabetic and diabetic obese mice suggest a role of hepatic lipogenic capacity in diabetes susceptibility. Diabetes 2003 Mar;52(3):688-700.

Examples

# NOT RUN {
#data(Liver.Muscle)
#Th<- ratio(data=Liver.Muscle)

#Rh<- baymod(iter=100,output.ratio=Th)

#MC<- Tmc(iter=100,output.ratio=Th)

#The gene names can be obtained using the command dimnames:
#feat.names = dimnames(Liver.Muscle)[[1]]
#feat.lists <- extractFeatures.R(output.ratio=Th,output.bay=Rh,feat.names=feat.names,h=NULL)
#feat.lists.T <- extractFeatures.T(output.ratio=Th,feat.names=feat.names)

#output.table <- createTable(output.ratio=Th,output.bay=Rh)

# }