query
to compose your query and get a list of sequence names. Remote access to ACNUC databases work
by opening a socket on a port (as an example on port number 5558 of pbil.univ-lyon1.fr) and by communicating on this socket following the protocol described in the section references
.choosebank(bank = NA, host = "pbil.univ-lyon1.fr", port = 5558))
socket
choosebank()
returns a list of all the databases located at the Pbil. See the reference section for more details.
ACNUC databases are made of a series of flat text files (called divisions) containing annotations and sequences and a series of index files allowing efficient access to sequence data.connection
function. For more information about the socket communication protocol with ACNUC please get at query
, connection
mybank = choosebank()
choosebank(mybank[1])
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