seqinr (version 1.0-1)

getLocation: Generic Function To obtain the Position of a Sequence on the Parent Sequence

Description

Methods for the class of sequences: SeqAcnucWeb. If the sequence is a subsequence (e.g. coding sequence), the function will return the position of each exon on the parent sequence.

Usage

getLocation(object)

Arguments

object
an object of the class SeqAcnucWeb.

Value

  • a list giving the positions of the sequence on the parent sequence.

References

� To have an overview of the seqinR's functionnality, please consult this vignette: Charif, D., Lobry, J.R. (2005) SeqinR: a contributed package to the R project for statistical computing devoted to biological sequences retrieval and analysis. Springer Verlag, Biological and Medical Physics/Biomedical Series, in preparation.

See Also

SeqAcnucWeb, query

Examples

Run this code
methods(getLocation)

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