BrCa443


BrCa443 is an ExpressionSet object that contains gene expression values for 7 genes, RKIP, HMGA2, SPP1, CXCR4, MMP1, metaBACH1, and metaLET7 for 443 breast cancer patients. It also contains paired survival data for each patient in the form of survival and event data.


By leveraging statistical properties (log-rank test for
survival) of patient cohorts defined by binary thresholds,
poor-prognosis patients are identified by the sigsquared
package via optimization over a cost function reducing type I
and II error.

UnJin Lee

sigsquared

Gene signature generation for functionally validated signaling
pathways

BrCa443 function

ExpressionSet with expression data and survival data

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BrCa443 is an ExpressionSet object that contains gene expression values for 7 genes, RKIP, HMGA2, SPP1, CXCR4, MMP1, metaBACH1, and metaLET7 for 443 breast cancer patients. It also contains paired survival data for each patient in the form of survival and event data.

BrCa443: Breast Cancer 443 Data Set

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