confint.profile.simode

Calculates confidence intervals for the model parameters,
based on the given likelihood profiles

Implements statistical inference for systems of ordinary differential equations,
that uses the integral-matching criterion and takes advantage of the separability of parameters,
in order to obtain initial parameter estimates for nonlinear least squares optimization.
Dattner & Yaari (2018) <arXiv:1807.04202>.
Dattner et al. (2017) <doi:10.1098/rsif.2016.0525>.
Dattner & Klaassen (2015) <doi:10.1214/15-EJS1053>.

Rami Yaari

simode

Statistical Inference for Systems of Ordinary Differential
Equations using Separable Integral-Matching

Itai Dattner

confint.profile.simode function

<dl><dt>object</dt>
<dd>A fitted model object: <code>profile.simode</code> object returned by a call to <code><a href="/link/profile?package=simode&version=1.2.2" data-mini-rdoc="simode::profile">profile</a></code>.</dd>
<dt>parm</dt>
<dd>A specification of which parameters are to be given confidence intervals (named vector).
If missing, all parameters are considered.</dd>
<dt>level</dt>
<dd>The confidence level required.</dd>
<dt>...</dt>
<dd>Additional argument(s) for methods.</dd></dl>

Arguments

Calculates confidence intervals for the model parameters — confint.profile.simode

<dl>

<dt>object</dt>
<dd>A fitted model object: <code>profile.simode</code> object returned by a call to <code><a href='https://rdrr.io/r/stats/profile.html'>profile</a></code>.</dd>


<dt>parm</dt>
<dd>A specification of which parameters are to be given confidence intervals (named vector).
If missing, all parameters are considered.</dd>


<dt>level</dt>
<dd>The confidence level required.</dd>


<dt>...</dt>
<dd>Additional argument(s) for methods.</dd>

</dl>

confint.profile.simode: Calculates confidence intervals for the model parameters

Description

Usage

Value

Arguments