snpEnrichment (version 1.2-3)

toyEnrichmentM2-dataset: Toy dataset with SNP data

Description

This data set gives an Enrichment object after, initFiles and readEnrichment is ran. The LD extend method used is "LD Block" (in readEnrichment: extendMethod="block"). LD blocks are defined by clustering all SNPs between two SNPs in LD. Genome Build 37.3 (hg19).

Usage

data(toyEnrichmentM2)
toyEnrichmentM2

format

See class Enrichment for details about the format.

See Also

Overview : snpEnrichment-package Classes : Enrichment, Chromosome, EnrichSNP Methods : plot, reSample, excludeSNP, compareEnrichment, enrichment, is.enrichment, chromosome, is.chromosome Functions : initFiles, writeLD, readEnrichment