p.adjustSP
From spdep v0.69
by Roger Bivand
Adjust local association measures' pvalues
Make an adjustment to local association measures' pvalues based on the number of neighbours (+1) of each region, rather than the total number of regions.
 Keywords
 spatial
Usage
p.adjustSP(p, nb, method = "none")
Arguments
 p
 vector of pvalues
 nb
 a list of neighbours of class
nb
 method
 correction method as defined in
p.adjust
: "The adjustment methods include the Bonferroni correction ('"bonferroni"') in which the pvalues are multiplied by the number of comparisons. Four less conservative corrections are also included by Holm (1979) ('"holm"'), Hochberg (1988) ('"hochberg"'), Hommel (1988) ('"hommel"') and Benjamini & Hochberg (1995) ('"fdr"'), respectively. A passthrough option ('"none"') is also included."
Value

A vector of corrected pvalues using only the number of neighbours + 1.
See Also
Examples
data(afcon)
oid < order(afcon$id)
resG < as.vector(localG(afcon$totcon, nb2listw(include.self(paper.nb))))
non < format.pval(pnorm(2*(abs(resG)), lower.tail=FALSE), 2)
bon < format.pval(p.adjustSP(pnorm(2*(abs(resG)), lower.tail=FALSE),
paper.nb, "bonferroni"), 2)
tot < format.pval(p.adjust(pnorm(2*(abs(resG)), lower.tail=FALSE),
"bonferroni", n=length(resG)), 2)
data.frame(resG, non, bon, tot, row.names=afcon$name)[oid,]
Community examples
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