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splicegear (version 1.44.0)

barplot.SpliceSites: barplot for SpliceSites

Description

Displays a barplot of the associated AnnotatedDataFrame.

Usage

"barplot"(height, type.as = c("typeI", "typeII", "all"), info = "tissue", ...)

Arguments

height
object of class SpliceSites-class.
type.as
the type of alternative splicing (see SpliteSites-class for further details).
info
the name of the covariate in the AnnotatedDataFrame (see details).
...
optional parameters to be passed to the underlying function barplot.

Value

See the value returned by the function barplot.

Details

When the objects are built from the XML format we propose as an exchange, the parameter info can at least take the values "tissue" and "histology". One can refer to the slots spsiteIpos.pData and spsiteIIpos.pData to know what are the possible choices.

See Also

SpliceSites-class, barplot

Examples

Run this code
data(spsites)
barplot(spsites)

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