spm12r (version 2.8.3)

spm12_coregister.deprecated: SPM12 Coregister (Estimate and Reslice)

Description

Performs SPM12 coregistration estimation and reslicing on an Image

Usage

spm12_coregister.deprecated(
  fixed,
  moving,
  other.files = NULL,
  prefix = "r",
  add_spm_dir = TRUE,
  spmdir = spm_dir(),
  clean = TRUE,
  verbose = TRUE,
  outdir = NULL,
  install_dir = NULL,
  ...
)

Arguments

fixed

File that is assumed fixed

moving

moving file to be registered to fixed space

other.files

Other files to register to fixed, in same space as moving file

prefix

Prefix to append to front of image filename

add_spm_dir

Add SPM12 directory from this package

spmdir

SPM dir to add, will use package default directory

clean

Remove scripts from temporary directory after running

verbose

Print diagnostic messages

outdir

Directory to copy results. If full filename given, then results will be in dirname(filename)

install_dir

directory to download SPM12

...

Arguments passed to run_spm12_script

Value

Result from run_matlab_script