spm12r (version 2.8.3)

Wrapper Functions for 'SPM' (Statistical Parametric Mapping) Version 12 from the 'Wellcome' Trust Centre for 'Neuroimaging'

Description

Installs 'SPM12' to the R library directory and has associated functions for 'fMRI' and general imaging utilities, called through 'MATLAB'.

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Version

Install

install.packages('spm12r')

Monthly Downloads

Version

2.8.3

License

GPL-2 | file LICENCE

Maintainer

John Muschelli

Last Published

March 4th, 2021

Functions in spm12r (2.8.3)

acpc_reorient

AC/PC Reorientation

install_spm12

Install SPM12 file into directory

spm12_normalize_est

SPM12 Normalize (Estimate)

ntime_points

Get number of time points from a file

spm12_normalize

SPM12 Normalize (Estimate and Write)

build_spm12_realign

SPM12 Realign (Estimate and Reslice)

spm12_normalize_write

SPM12 Normalize (Write)

group_xyz

Center of Gravity for Multiple Areas

Build contrasts query for SPM12 results

spm12_smooth

SPM12 Smooth

filename_check

Perform filename checks for SPM

spm_bwlabel

SPM BWLabel Clusters of Certain Size

spm12_realign_est

SPM12 Realign (Estimate)

spm12_fmri_est

SPM12 FMRI Estimation

build_spm12_first_level_spec

SPM12 fMRI First Level Specification

build_spm12_coregister

Batch SPM12 Coregister (Estimate and Reslice)

spm12_realign.deprecated

SPM12 Realign (Estimate and Reslice)

run_matlabbatch

Run Matlab Batch from List

spm_probs_to_seg

SPM Probability to Hard Segmentation

spm_version

SPM Version

spm12_contrast

Build contrasts for SPM12 first level model

spm12_results

SPM12 Results Report

spm12_regressor

Build Regressors for SPM12 first level model

spm_directory

SPM Directory

spm12_contrast_manager

SPM12 fMRI Contrasts

spm12_slice_timing

SPM12 Slice Timing Correction

spm12_condition

Build Conditions for SPM12 first level model

run_spm12_script

Wrapper for running spm12_script

spm12_slice_timing.deprecated

SPM12 Slice Timing Correction

build_spm12_first_level

SPM12 fMRI First Level Model

bwconncomp

Label Connected Clusters of Certain Size

spm12_coregister.deprecated

SPM12 Coregister (Estimate and Reslice)