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spotSegmentation (version 1.46.0)

Microarray Spot Segmentation and Gridding for Blocks of Microarray Spots

Description

Spot segmentation via model-based clustering and gridding for blocks within microarray slides, as described in Li et al, Robust Model-Based Segmentation of Microarray Images, Technical Report no. 473, Department of Statistics, University of Washington.

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Version

Version

1.46.0

License

GPL (>= 2)

Maintainer

Chris Fraley

Last Published

February 15th, 2017

Functions in spotSegmentation (1.46.0)

spotSegTest

Spot Segmentation Test Data
spotseg

Microarray Spot Segmentation
plot.spotseg

Microarray Spot Segmentation Plot
summary.spotseg

Microarray Spot Segmentation Summary
spotgrid

Gridding for Blocks of Microarray Spots
plotBlockImage

Plot Microarray Image Block