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ssviz (version 1.6.2)

A small RNA-seq visualizer and analysis toolkit

Description

Small RNA sequencing viewer

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Version

Version

1.6.2

License

GPL-2

Maintainer

Diana Low

Last Published

February 15th, 2017

Functions in ssviz (1.6.2)

counts

counts data
getCountMatrix-methods

getCountMatrix
ctrlbam

ctrlbam data
plotRegion

plotRegion
ntfreq

ntfreq
readBam-methods

readBam
plotDistro-methods

plotDistro
ntfreq-methods

ntfreq
plotPP

plotPP
plotFreq

plotFreq
readBam

readBam
pingpong-methods

pingpong
plotRegion-methods

plotRegion
pctrlbam

pctrlbam data
treatbam

treatbam data
plotDistro

plotDistro
pingpong

pingpong
ssviz-package

ssviz
plotPP-methods

plotPP
logicalORmissing-class

Class "logicalORmissing"
plotFreq-methods

plotFreq
getCountMatrix

getCountMatrix
ptreatbam

ptreatbam data