SpADataExpression: Data expression of the 75 DE genes identified by LIMMA in SpA sample data.
Description
The example data provided in our package are transcriptomic profiles of MD-DCs from 9 patients with AS and 10 healthy controls. DE gene statistics group 75 genes identified by LIMMA. Samples description is also provided.
Usage
data("SpADataExpression")
Format
A data frame with 75 observations on the following 57 variables.
- 21
- a numeric vector
- 22
- a numeric vector
- 23
- a numeric vector
- 24
- a numeric vector
- 25
- a numeric vector
- 26
- a numeric vector
- 27
- a numeric vector
- 30
- a numeric vector
- 31
- a numeric vector
- 32
- a numeric vector
- 33
- a numeric vector
- 34
- a numeric vector
- 35
- a numeric vector
- 36
- a numeric vector
- 37
- a numeric vector
- 38
- a numeric vector
- 39
- a numeric vector
- 40
- a numeric vector
- 41
- a numeric vector
- 42
- a numeric vector
- 43
- a numeric vector
- 44
- a numeric vector
- 45
- a numeric vector
- 46
- a numeric vector
- 47
- a numeric vector
- 48
- a numeric vector
- 50
- a numeric vector
- 51
- a numeric vector
- 52
- a numeric vector
- 53
- a numeric vector
- 54
- a numeric vector
- 55
- a numeric vector
- 56
- a numeric vector
- 57
- a numeric vector
- 58
- a numeric vector
- 59
- a numeric vector
- 60
- a numeric vector
- 61
- a numeric vector
- 62
- a numeric vector
- 63
- a numeric vector
- 64
- a numeric vector
- 65
- a numeric vector
- 66
- a numeric vector
- 67
- a numeric vector
- 68
- a numeric vector
- 70
- a numeric vector
- 71
- a numeric vector
- 72
- a numeric vector
- 73
- a numeric vector
- 74
- a numeric vector
- 75
- a numeric vector
- 76
- a numeric vector
- 77
- a numeric vector
- 78
- a numeric vector
- 79
- a numeric vector
- 80
- a numeric vector
- 48_49
- a numeric vector
Source
Talpin, A. et al. Monocyte-derived dendritic cells from HLA-B27+ axial spondyloarthritis (SpA) patients display altered functional capacity and deregulated gene expression. Arthritis Res. Ther. 16, 417 (2014).Details
Data comes from Affymetrix HumanGene 1.0 st technology and was normalized using rma.
Examples
Run this codedata(SpADataExpression)
head(SpADataExpression)
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