stringgaussnet (version 1.1)

plot.SIMoNeNet:

Plot SIMoNeNet

Description

This function plots an object of class SIMoNeNet. The same function as in simone package is used.

Usage

"plot"(x, name = x[["name"]], ...)

Arguments

x

An object of class SIMoNeNet

name

The name to be displayed as title in the plot

...

Additional parameters from the generic plot function. Not used here.

See Also

getSIMoNeNet

Examples

# data(SpADataExpression)
# data(SpADEGenes)
# SpAData<-DEGeneExpr(t(SpADataExpression),SpADEGenes)

# NodesForSIMoNe<-rownames(SpADEGenes)[1:17]
# GaussianSpAData<-DEGeneExpr(t(SpADataExpression[NodesForSIMoNe,]),SpADEGenes[NodesForSIMoNe,])

# pickSIMoNeParam(GaussianSpAData)

# GlobalSIMoNeNet<-getSIMoNeNet(GaussianSpAData)
# GlobalSIMoNeNet<-FilterEdges(GlobalSIMoNeNet,0.4)
# print(GlobalSIMoNeNet,5)
# summary(GlobalSIMoNeNet)
# plot(GlobalSIMoNeNet)

# export(GlobalSIMoNeNet,"GlobalSIMoNeNet",T)