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Install
install.packages('survival')
Monthly Downloads
204,172
Version
3.2-10
License
LGPL (>= 2)
Issues
13
Pull Requests
5
Stars
175
Forks
70
Repository
https://github.com/therneau/survival
Maintainer
Terry Therneau
Last Published
March 16th, 2021
Functions in survival (3.2-10)
Search functions
Surv-methods
Methods for Surv objects
aml
Acute Myelogenous Leukemia survival data
Surv
Create a Survival Object
agreg.fit
Cox model fitting functions
aareg
Aalen's additive regression model for censored data
aeqSurv
Adjudicate near ties in a Surv object
aggregate.survfit
Average survival curves
anova.coxph
Analysis of Deviance for a Cox model.
Surv2
Create a survival object
Surv2data
Convert data from timecourse to (time1,time2) style
bladder
Bladder Cancer Recurrences
attrassign
Create new-style "assign" attribute
cch
Fits proportional hazards regression model to case-cohort data
cgd
Chronic Granulotamous Disease data
cluster
Identify clusters.
clogit
Conditional logistic regression
coxph.object
Proportional Hazards Regression Object
coxph.detail
Details of a Cox Model Fit
coxph
Fit Proportional Hazards Regression Model
coxph.control
Ancillary arguments for controlling coxph fits
flchain
Assay of serum free light chain for 7874 subjects.
finegray
Create data for a Fine-Gray model
coxsurv.fit
A direct interface to the `computational engine' of survfit.coxph
basehaz
Alias for the survfit function
coxph.wtest
Compute a quadratic form
frailty
Random effects terms
cgd0
Chronic Granulotomous Disease data
blogit
Bounded link functions
logLik.coxph
logLik method for a Cox model
concordance
Compute the concordance statistic for data or a model
lines.survfit
Add Lines or Points to a Survival Plot
colon
Chemotherapy for Stage B/C colon cancer
gbsg
Breast cancer data sets used in Royston and Altman (2013)
mgus2
Monoclonal gammopathy data
mgus
Monoclonal gammopathy data
dsurvreg
Distributions available in survreg.
diabetic
Ddiabetic retinopathy
heart
Stanford Heart Transplant data
levels.Surv
Return the states of a multi-state Surv object
cipoisson
Confidence limits for the Poisson
concordancefit
Compute the concordance
kidney
Kidney catheter data
model.frame.coxph
Model.frame method for coxph objects
cox.zph
Test the Proportional Hazards Assumption of a Cox Regression
model.matrix.coxph
Model.matrix method for coxph models
plot.aareg
Plot an aareg object.
is.ratetable
Verify that an object is of class ratetable.
logan
Data from the 1972-78 GSS data used by Logan
lung
NCCTG Lung Cancer Data
print.summary.survfit
Print Survfit Summary
nwtco
Data from the National Wilm's Tumor Study
nafld
Non-alcohol fatty liver disease
pbcseq
Mayo Clinic Primary Biliary Cirrhosis, sequential data
myeloid
Acute myeloid leukemia
pbc
Mayo Clinic Primary Biliary Cholangitis Data
plot.survfit
Plot method for
survfit
objects
print.summary.coxph
Print method for summary.coxph objects
plot.cox.zph
Graphical Test of Proportional Hazards
print.summary.survexp
Print Survexp Summary
predict.coxph
Predictions for a Cox model
ovarian
Ovarian Cancer Survival Data
residuals.coxph
Calculate Residuals for a `coxph' Fit
pyears
Person Years
predict.survreg
Predicted Values for a `survreg' Object
print.survfit
Print a Short Summary of a Survival Curve
reliability
Reliability data sets
rats
Rat treatment data from Mantel et al
solder
Data from a soldering experiment
print.aareg
Print an aareg object
rats2
Rat data from Gail et al.
quantile.survfit
Quantiles from a survfit object
neardate
Find the index of the closest value in data set 2, for each entry in data set one.
survexp.object
Expected Survival Curve Object
ratetables
Census Data Sets for the Expected Survival and Person Years Functions
stanford2
More Stanford Heart Transplant data
summary.coxph
Summary method for Cox models
survexp.fit
Compute Expected Survival
survexp
Compute Expected Survival
summary.aareg
Summarize an aareg fit
ratetableDate
Convert date objects to ratetable form
ratetable
Rate table structure
residuals.survfit
IJ residuals from a survfit object.
statefig
Draw a state space figure.
residuals.survreg
Compute Residuals for `survreg' Objects
strata
Identify Stratification Variables
royston
Compute Royston's D for a Cox model
rttright
Compute redistribute-to-the-right weights
nsk
Natural splines with knot heights as the basis.
summary.survfit
Summary of a Survival Curve
survfit.object
Survival Curve Object
survfit0
Convert the format of a survfit object.
survSplit
Split a survival data set at specified times
pseudo
Pseudo values for survival.
survfit.formula
Compute a Survival Curve for Censored Data
survfit
Create survival curves
summary.pyears
Summary function for pyears objecs
pspline
Smoothing splines using a pspline basis
survfitcoxph.fit
A direct interface to the `computational engine' of survfit.coxph
summary.survexp
Summary function for a survexp object
tmerge
Time based merge for survival data
tobin
Tobin's Tobit data
retinopathy
Diabetic Retinopathy
tcut
Factors for person-year calculations
survfit.coxph
Compute a Survival Curve from a Cox model
uspop2
Projected US Population
untangle.specials
Help Process the `specials' Argument of the `terms' Function.
survival-deprecated
Deprecated functions in package
survival
rhDNase
rhDNASE data set
survreg
Regression for a Parametric Survival Model
survregDtest
Verify a survreg distribution
survfit.matrix
Create Aalen-Johansen estimates of multi-state survival from a matrix of hazards.
ridge
Ridge regression
rotterdam
Breast cancer data set used in Royston and Altman (2013)
survdiff
Test Survival Curve Differences
survival-internal
Internal survival functions
survreg.control
Package options for survreg and coxph
survcheck
Checks of a survival data set
transplant
Liver transplant waiting list
survreg.object
Parametric Survival Model Object
survreg.distributions
Parametric Survival Distributions
yates_setup
Method for adding new models to the
yates
function.
vcov.coxph
Variance-covariance matrix
veteran
Veterans' Administration Lung Cancer study
udca
Data from a trial of usrodeoxycholic acid
survobrien
O'Brien's Test for Association of a Single Variable with Survival
xtfrm.Surv
Sorting order for Surv objects
yates
Population prediction