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Install
install.packages('survival')
Monthly Downloads
159,827
Version
3.2-13
License
LGPL (>= 2)
Issues
9
Pull Requests
5
Stars
199
Forks
80
Repository
https://github.com/therneau/survival
Maintainer
Terry Therneau
Last Published
August 24th, 2021
Functions in survival (3.2-13)
Search functions
Surv2data
Convert data from timecourse to (time1,time2) style
aml
Acute Myelogenous Leukemia survival data
Surv
Create a Survival Object
aareg
Aalen's additive regression model for censored data
Surv2
Create a survival object
agreg.fit
Cox model fitting functions
aeqSurv
Adjudicate near ties in a Surv object
aggregate.survfit
Average survival curves
anova.coxph
Analysis of Deviance for a Cox model.
Surv-methods
Methods for Surv objects
basehaz
Alias for the survfit function
attrassign
Create new-style "assign" attribute
cgd0
Chronic Granulotomous Disease data
clogit
Conditional logistic regression
cluster
Identify clusters.
coxph.control
Ancillary arguments for controlling coxph fits
cgd
Chronic Granulotamous Disease data
concordancefit
Compute the concordance
cox.zph
Test the Proportional Hazards Assumption of a Cox Regression
cch
Fits proportional hazards regression model to case-cohort data
coxph
Fit Proportional Hazards Regression Model
diabetic
Ddiabetic retinopathy
cipoisson
Confidence limits for the Poisson
kidney
Kidney catheter data
dsurvreg
Distributions available in survreg.
coxph.object
Proportional Hazards Regression Object
logan
Data from the 1972-78 GSS data used by Logan
coxph.detail
Details of a Cox Model Fit
bladder
Bladder Cancer Recurrences
gbsg
Breast cancer data sets used in Royston and Altman (2013)
coxsurv.fit
A direct interface to the `computational engine' of survfit.coxph
model.frame.coxph
Model.frame method for coxph objects
frailty
Random effects terms
coxph.wtest
Compute a quadratic form
lines.survfit
Add Lines or Points to a Survival Plot
levels.Surv
Return the states of a multi-state Surv object
nafld
Non-alcohol fatty liver disease
logLik.coxph
logLik method for a Cox model
model.matrix.coxph
Model.matrix method for coxph models
neardate
Find the index of the closest value in data set 2, for each entry in data set one.
blogit
Bounded link functions
colon
Chemotherapy for Stage B/C colon cancer
plot.cox.zph
Graphical Test of Proportional Hazards
plot.survfit
Plot method for
survfit
objects
finegray
Create data for a Fine-Gray model
flchain
Assay of serum free light chain for 7874 subjects.
concordance
Compute the concordance statistic for data or a model
pbcseq
Mayo Clinic Primary Biliary Cirrhosis, sequential data
print.survfit
Print a Short Summary of a Survival Curve
pbc
Mayo Clinic Primary Biliary Cholangitis Data
mgus
Monoclonal gammopathy data
is.ratetable
Verify that an object is of class ratetable.
myeloid
Acute myeloid leukemia
plot.aareg
Plot an aareg object.
heart
Stanford Heart Transplant data
lung
NCCTG Lung Cancer Data
myeloma
Survival times of patients with multiple myeloma
print.summary.survexp
Print Survexp Summary
mgus2
Monoclonal gammopathy data
predict.survreg
Predicted Values for a `survreg' Object
quantile.survfit
Quantiles from a survfit object
predict.coxph
Predictions for a Cox model
pspline
Smoothing splines using a pspline basis
rhDNase
rhDNASE data set
pyears
Person Years
ratetable
Rate table structure
survexp.fit
Compute Expected Survival
ridge
Ridge regression
rats2
Rat data from Gail et al.
reliability
Reliability data sets
royston
Compute Royston's D for a Cox model
pseudo
Pseudo values for survival.
summary.coxph
Summary method for Cox models
ovarian
Ovarian Cancer Survival Data
rotterdam
Breast cancer data set used in Royston and Altman (2013)
summary.aareg
Summarize an aareg fit
retinopathy
Diabetic Retinopathy
summary.pyears
Summary function for pyears objecs
residuals.survreg
Compute Residuals for `survreg' Objects
strata
Identify Stratification Variables
survfit0
Convert the format of a survfit object.
survexp.object
Expected Survival Curve Object
statefig
Draw a state space figure.
survfit
Create survival curves
survival-deprecated
Deprecated functions in package
survival
ratetables
Census Data Sets for the Expected Survival and Person Years Functions
yates
Population prediction
stanford2
More Stanford Heart Transplant data
survreg
Regression for a Parametric Survival Model
nsk
Natural splines with knot heights as the basis.
survobrien
O'Brien's Test for Association of a Single Variable with Survival
solder
Data from a soldering experiment
survfitcoxph.fit
A direct interface to the `computational engine' of survfit.coxph
survreg.control
Package options for survreg and coxph
residuals.survfit
IJ residuals from a survfit object.
nwtco
Data from the National Wilm's Tumor Study
print.summary.survfit
Print Survfit Summary
residuals.coxph
Calculate Residuals for a `coxph' Fit
survreg.distributions
Parametric Survival Distributions
survdiff
Test Survival Curve Differences
survexp
Compute Expected Survival
survival-internal
Internal survival functions
untangle.specials
Help Process the `specials' Argument of the `terms' Function.
udca
Data from a trial of usrodeoxycholic acid
survreg.object
Parametric Survival Model Object
survSplit
Split a survival data set at specified times
tcut
Factors for person-year calculations
survfit.matrix
Create Aalen-Johansen estimates of multi-state survival from a matrix of hazards.
survcheck
Checks of a survival data set
survregDtest
Verify a survreg distribution
tmerge
Time based merge for survival data
yates_setup
Method for adding new models to the
yates
function.
uspop2
Projected US Population
vcov.coxph
Variance-covariance matrix
survfit.object
Survival Curve Object
print.summary.coxph
Print method for summary.coxph objects
ratetableDate
Convert date objects to ratetable form
rats
Rat treatment data from Mantel et al
print.aareg
Print an aareg object
rttright
Compute redistribute-to-the-right weights
survfit.coxph
Compute a Survival Curve from a Cox model
survfit.formula
Compute a Survival Curve for Censored Data
summary.survexp
Summary function for a survexp object
transplant
Liver transplant waiting list
summary.survfit
Summary of a Survival Curve
veteran
Veterans' Administration Lung Cancer study
tobin
Tobin's Tobit data
xtfrm.Surv
Sorting order for Surv objects