sybilcycleFreeFlux-package

sybilcycleFreeFlux

<p>The package <code>sybilcycleFreeFlux</code> implements some ideas to get rid of cycles.
 Also implement sampling and loopless sampling.</p>

 package

Implement cycle-Free flux balance analysis (CycleFreeFlux), cycle-free flux variability, and Random Sampling of solution space.
Desouki, A. A., Jarre, F., Gelius-Dietrich, G., & Lercher, M. J. (2015). CycleFreeFlux: efficient removal of thermodynamically
infeasible loops from flux distributions. Bioinformatics, 31(13), 2159-2165. <doi:10.1093/bioinformatics/btv096>.
Flux balance analysis is a technique to find fluxes in metabolic models at steady state.
It is described in Orth, J.D., Thiele, I. and Palsson, B.O. What is flux balance analysis? Nat. Biotech. 28, 245-248 (2010).

Package:	sybilcycleFreeFlux
Type:	Package
Version:	0.0.1
Date:	2013-06-03
License:	GPL Version 3
LazyLoad:	yes
Depends:	`sybil`, methods

sybilcycleFreeFlux-package: Find flux distribution free of cycles

Description

Arguments

Details

See Also