taxize (version 0.2.0)

get_seqs: Retrieve gene sequences from NCBI by accession number.

Description

Function name changed to ncbi_getbyname.

Usage

get_seqs(taxa, gene = "COI", seqrange = "1:3000", getrelated = FALSE,
  verbose = TRUE)

Arguments

taxa

Scientific name to search for (character).

gene

Gene (character) or genes (character vector) to search for.

seqrange

Sequence range, as e.g., "1:1000" (character).

getrelated

Logical, if TRUE, gets the longest sequences of a species in the same genus as the one searched for. If FALSE, get's nothing.

verbose

logical; If TRUE (default), informative messages printed.