Get accepted names from tsn
Parse taxon names using the GBIF name parser.
getjurisdictionaloriginfromtsn
Get jurisdictional origin from tsn
Get any match count.
Retrieve taxonomic identifiers for a given taxon name.
Search Catalogue of Life for for direct children of a particular taxon.
Retrieve accepted TSN (with accepted name).
Search Catalogue of Life for taxonomic IDs
Get currency from tsn
Get references related to a ITIS TSN.
Get the GBIF backbone taxon ID from taxonomic names.
Get comment detail from TSN
Retrieve gene sequences from NCBI by accession number.
Get date data from tsn
Get itis terms from common names
Retrieve gene sequences from NCBI by accession number.
Get the TSN code for a search term.
getjurisdictionoriginvalues
Get jurisdiction origin values
getgeographicdivisionsfromtsn
Get geographic divisions from tsn
Convert list of classifications to a tree.
Lookup-table for APGIII family names
Search Catalogue of Life for taxonomic classifications.
Get full hierarchy from tsn
getglobalspeciescompletenessfromtsn
Get global species completeness from tsn
Parse scientific names using EOL's name parser.
Get the Catalogue of Life ID from taxonomic names.
Get all possible geographic values
getunacceptabilityreasonfromtsn
Returns the unacceptability reason, if any, for the TSN.
Get scientific names from common names.
Get expert information for the TSN.
Retrieve the taxonomic hierarchy from given EOL taxonID.
Get the EOL ID from Encyclopedia of Life from taxonomic names.
Gets the TSN corresponding to the LSID, or an empty result if there is no match.
getitistermsfromscientificname
Get itis terms from scientific names
Get possible jurisdiction values
Search for pages in EOL database using a taxonconceptID.
Get hierarchy up from tsn
Get rank for a given taxonomic name.
Ping EOL API to see if it's working.
Get hierarchies from TSN values, full, upstream only, or immediate downstream
only
Search for taxonomic names using the Global Names Index.
Gets the partial ITIS record for the TSN in the LSID, found by comparing the
TSN in the search key to the TSN field. Returns an empty result set if
there is no match or the TSN is invalid.
Lookup in the APGII taxonomy and replace family names.
searchbycommonnamebeginswith
Search for tsn by common name beginning with
Provides a list of all the unique rank names contained in the database and
their kingdom and rank ID values.
Get hierarchy down from tsn
getcredibilityratingfromtsn
Get credibility rating from tsn
Returns a list of the synonyms (if any) for the TSN.
Returns the scientific name for the TSN. Also returns the component parts
(names and indicators) of the scientific name.
gettaxonomicranknamefromtsn
Returns the kingdom and rank information for the TSN.
Get full record from TSN.
Search for presence of taxonomic names in EOL invasive species databases.
Get core metadata from tsn
Get the NameID codes from Tropicos for taxonomic names.
Lookup-table for APGIII order names
Fields available in gbif_suggest function
Get possible credibility ratings
Get the UID codes from NCBI for taxonomic names.
Get coverge from tsn
getitistermsfromcommonname
Get itis terms from common names
Get description of the ITIS service
Get kingdom names from tsn
Function to parse xml data and decode strings
Use Catalogue of Life to get downstream taxa to a given taxonomic level.
Gets the unique LSID for the TSN, or an empty result if there is no match.
Search Tropicos by scientific name, common name, or Tropicos ID.
Ping the ITIS API to see if it's working.
gettsnbyvernacularlanguage
Retrieve accepted TSN (with accepted name)
Returns a list of the pulications used for the TSN.
Searches common name and acts as thin wrapper around searchbycommonnamebeginswith and searchbycommonnameendswith
Return all accepted names for a taxon name with a given id.
Get common names from tsn
Get all possible kingdom names
Resolve names using Global Names Resolver.
ubio_classification_search
This function will return all ClassificationBank data pertaining to a
particular ClassificationBankID
Get The Plant List csv files.
Check invasive species status for a set of species from GISD database
Retrieve all taxa names or TSNs downstream in hierarchy from given TSN.
Returns the parent TSN for the entered TSN.
Table of APGIII generic names
gettaxonauthorshipfromtsn
Returns the author information for the TSN.
Get The Plant List families.
Returns the full ITIS record for the TSN in the LSID, found by comparing the
TSN in the search key to the TSN field. Returns an empty result set if
there is no match or the TSN is invalid.
Aggregate data by given taxonomic rank
Returns the review year for the TSN.
Returns a list of the other sources used for the TSN.
Return all synonyms for a taxon name with a given id.
Provides the date the ITIS database was last updated.
Replacement function for ldply that should be faster in all cases.
Get ITIS terms, i.e., tsn's, authors, common names, and scientific names.
Search by scientific name
Function to get API key.
Retrieve taxonomic rank name from given TSN.
Vector of 1,182 species names of plants
Return all distribution records for for a taxon name with a given id.
Provides a list of the unique languages used in the vernacular table.
Return all distribution records for for a taxon name with a given id.
Retrieve synonyms from various sources given input taxonomic names or identifiers.
Get kingdom names.
searchbycommonnameendswith
Search for tsn by common name ending with
Get full ITIS record for one or more ITIS TSN's or lsid's.
Search for gene sequences available for a species from NCBI.
Get taxonomic names for a given taxonomic name query.
Get common names from scientific names.
Get family names to make Phylomatic input object, and output input string
to Phylomatic for use in the function phylomatic_tree.
Get a summary from the IUCN Red List.
Get data sources for the Global Names Resolver.
Get kingdom names.
Capitalize the first letter of a character string.
Search the Phylotastic Taxonomic Name Resolution Service.
Deprecated functions in taxize
Query Phylomatic for a phylogenetic tree.
Get any matching IUCN species names
Search for taxonomy data from Plantminer.com
Resolve names using Global Names Recognition and Discovery.
Get taxonomic names for a given rank.
Lookup-table for IDs of taxonomic ranks
Search for taxonomic name details using the Global Names Index.
A light wrapper around the taxonstand fxn to call Theplantlist.org database.
Function to parse xml data, decode strings, and return NULL if logical is zero.
Retrieve gene sequences from NCBI by taxon name and gene names.
Return all reference records for for a taxon name with a given id.
Taxnomic search and phylogeny retrieval.
Return all reference records for for a taxon name with a given id.
This function will return all ClassificationBank data pertaining to a
particular ClassificationBankID
Extractor functions for iucn-class.
Search uBio by namebank ID.
Get jurisdiction data, i.e., native or not native in a region.
Aggregate species data to given taxonomic rank
Lookup-table for family, genus, and species names for ThePlantList
Return summary data a taxon name with a given id.
Search for any match
Return all synonyms for a taxon name with a given id.
Search uBio by namebank ID.
Get a random vector of species names.
Search the CANADENSYS Vascan API.
Search for tsn by common name
This function will return NameBankIDs that match given search terms
Search for any matched page
Get sources for the Phylotastic Taxonomic Name Resolution Service.
Return all accepted names for a taxon name with a given id.
Search for terms in EOL database.
Returns the usage information for the TSN.
Retrieve the taxonomic hierarchy for a given taxon ID.
Retrieve gene sequences from NCBI by accession number.
Retrieve gene sequences from NCBI by accession number.
Vector of 793 genus names of plants
Given the identifier for a data object, return all metadata about the object.