separate_tags

Separates locus tags mentioned in full text and expands ranges like
YPO1970-74 into new rows

Parse XML documents from the Open Access subset of Europe PubMed Central <https://europepmc.org>
including section paragraphs, tables, captions and references.

Chris Stubben

tidypmc

Parse Full Text XML Documents from PubMed Central

separate_tags function

<dl><dt>txt</dt>
<dd>a table</dd>
<dt>pattern</dt>
<dd>regular expression to match locus tags like YPO[0-9-]+ or
the locus tag prefix like YPO.</dd>
<dt>column</dt>
<dd>column name to search, default "text"</dd></dl>

Arguments

Author

Separate locus tag into multiple rows — separate_tags

<dl>

<dt>txt</dt>
<dd>a table</dd>


<dt>pattern</dt>
<dd>regular expression to match locus tags like YPO[0-9-]+ or
the locus tag prefix like YPO.</dd>


<dt>column</dt>
<dd>column name to search, default "text"</dd>

</dl>

separate_tags: Separate locus tag into multiple rows

Description

Usage

Value

Arguments

Author

Examples