trackViewer (version 1.8.4)

optimizeStyle: Optimize the style of plot

Description

Automatic optimize the stlye of trackViewer

Usage

optimizeStyle(trackList, viewerStyle=trackViewerStyle(), theme=NULL)

Arguments

trackList

An object of trackList

viewerStyle

An object of trackViewerStyle

theme

A character string. Could be "bw" or "col".

Value

a list of a trackList and a trackViewerStyle

See Also

See Also as viewTracks

Examples

    extdata <- system.file("extdata", package="trackViewer",
                       mustWork=TRUE)
    files <- dir(extdata, ".wig")
    tracks <- lapply(paste(extdata, files, sep="/"), 
                        importScore, format="WIG")
    re <- optimizeStyle(trackList(tracks))
    trackList <- re$tracks
    viewerStyle <- re$style

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