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triform (version 1.14.0)

Triform finds enriched regions (peaks) in transcription factor ChIP-sequencing data

Description

The Triform algorithm uses model-free statistics to identify peak-like distributions of TF ChIP sequencing reads, taking advantage of an improved peak definition in combination with known profile characteristics.

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Version

Version

1.14.0

License

GPL-2

Maintainer

Tony Handstad Developer

Last Published

February 15th, 2017

Functions in triform (1.14.0)

triform-package

Triform finds peaks in ChIP-sequencing data.
triform

Run Triform peak detection algorithm.
preprocess

Preprocess BED-files with reads to calculate chromosome coverage