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tteICE (version 1.1.1)

Treatment Effect Estimation for Time-to-Event Data with Intercurrent Events

Description

Analysis of treatment effects in clinical trials with time-to-event outcomes is complicated by intercurrent events. This package implements methods for estimating and inferring the cumulative incidence functions for time-to-event (TTE) outcomes with intercurrent events (ICE) under the five strategies outlined in the ICH E9 (R1) addendum, see Deng (2025) . This package can be used for analyzing data from both randomized controlled trials and observational studies. In general, the data involve a primary outcome event and, potentially, an intercurrent event. Two data structures are allowed: competing risks, where only the time to the first event is recorded, and semicompeting risks, where the times to both the primary outcome event and intercurrent event (or censoring) are recorded. For estimation methods, users can choose nonparametric estimation (which does not use covariates) and semiparametrically efficient estimation.

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Install

install.packages('tteICE')

Monthly Downloads

139

Version

1.1.1

License

GPL-3

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Maintainer

Yi Zhou

Last Published

February 4th, 2026

Functions in tteICE (1.1.1)

surv.natural.eff

Fit CIFs using hypothetical strategy (I) for competing risks data, based on efficient influence functions
surv.principal.eff

Fit CIFs using principal stratum strategy for competing risks data, based on efficient influence functions
surv.composite.eff

Fit CIFs using composite variable strategy for competing risks data, based on efficient influence functions
surv.removed

Fit CIFs using hypothetical strategy (II) for competing risks data
surv.HR

Estimate hazard ratios
surv.composite

Fit CIFs using composite variable strategy for competing risks data
surv.principal

Fit CIFs using principal stratum strategy for competing risks data
surv.natural

Fit CIFs using hypothetical strategy (I) for competing risks data
surv.removed.eff

Fit CIFs using hypothetical strategy (II) for competing risks data, based on efficient influence functions
surv.boot

Calculate standard errors for estimated CIFs and treatment effects
tteICEShiny

Shiny app for tteICE
tteICE-package

tteICE: Treatment Effect Estimation for Time-to-Event Data with Intercurrent Events
surv.whileon

Fit CIFs using while on treatment strategy for competing risks data
surv.whileon.eff

Fit CIFs using while on treatment strategy for competing risks data, based on efficient influence functions
surv.treatment

Fit CIFs using treatment policy strategy for competing risks data
surv.tteICE

Fit CIFs for competing risks time-to-event data with intercurrent events.
surv.treatment.eff

Fit CIFs using treatment policy strategy for competing risks data, based on efficient influence functions
tteICE

Using formula to fit CIFs for time-to-event data with intercurrent events
scr.composite.eff

Fit CIFs using composite variable strategy for semicompeting risks data, based on efficient influence functions
predict.tteICE

Predict method for 'tteICE' objects at specific time points
plot.tteICE

Plot method for 'tteICE' objects
scr.natural

Fit CIFs using hypothetical strategy (I) for semicompeting risks data
bmt

Data from Section 1.3 of Klein and Moeschberger (1997)
plot_inc

Plot estimated cumulative incidence functions (CIFs)
scr.composite

Fit CIFs using composite variable strategy for semicompeting risks data
print.tteICE

Print method for 'tteICE' objects
plot_ate

Plot estimated treatment effects
scr.natural.eff

Fit CIFs using hypothetical strategy (I) for semicompeting risks data, based on efficient influence functions
scr.principal

Fit CIFs using principal stratum strategy for semicompeting risks data
scr.removed.eff

Fit CIFs using hypothetical strategy (II) for semicompeting risks data, based on efficient influence functions
scr.treatment.eff

Fit CIFs using treatment policy strategy for semicompeting risks data, based on efficient influence functions
scr.treatment

Fit CIFs using treatment policy strategy for semicompeting risks data
scr.principal.eff

Fit CIFs using principal stratum strategy for semicompeting risks data, based on efficient influence functions
scr.tteICE

Fit CIFs for semicompeting risks time-to-event data with intercurrent events.
scr.removed

Fit CIFs using hypothetical strategy (II) for semicompeting risks data
scr.whileon

Fit CIFs using while on treatment strategy for semicompeting risks data
scr.whileon.eff

Fit CIFs using while on treatment strategy for semicompeting risks data, based on efficient influence functions
summary.tteICE

Summary method for 'tteICE' objects