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tweeDEseq (version 1.18.0)
RNA-seq data analysis using the Poisson-Tweedie family of distributions
Description
Differential expression analysis of RNA-seq using the Poisson-Tweedie family of distributions.
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Version
1.18.0
1.16.0
1.14.0
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Version
1.18.0
License
GPL (>= 2)
Maintainer
Juan Gonzalez
Last Published
January 1st, 1970
Functions in tweeDEseq (1.18.0)
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tweeDEseq-internal
Internal 'tweeDEseq' functions
normalizeCounts
Count data normalization
gofTest
Test the goodness of fit of every row in a matrix of counts
testShapePT
Test shape parameter of PT
qqchisq
Chi-square quantile-quantile plot
tweeDE
Score test for differences between two Poisson-Tweedie groups
glmPT
Fit Poisson-Tweedie generalized linear model.
mlePoissonTweedie
Maximum likelihood estimation of the Poisson-Tweedie parameters
filterCounts
Count data filtering
seizure
Epileptic seizure counts
tweeDExact
Exact test for differences between two Poisson-Tweedie groups
dPT
The Poisson-Tweedie family of distributions
Methods for objects of class 'mlePT'
Methods for objects of class 'mlePT'
compareCountDist
Compare count data distributions