speciesLISA-class

spoint-class

print,speciesLISA-method

An object of the <code>speciesLISA</code> class contains information about a local indicator of spatial association (LISA) statistic in predictor variables at the location of species occurrences. The object can be created with the function: <code>speciesLisa</code>.

classes

spatial

This is a framework that aims to provide methods and tools for assessing the impact of different sources of uncertainties (e.g.positional uncertainty) on performance of species distribution models (SDMs).)

Babak Naimi

usdm

Uncertainty Analysis for Species Distribution Models

speciesLISA-class function

Slots for speciesLISA object:<dl>
 <dt><code>species</code>:</dt>
<dd>object of class <code>SpatialPoints</code></dd>
 
 <dt><code>data</code>:</dt>
<dd><code>data.frame</code>, attribute table of species points</dd> <dt><code>LISAs</code>:</dt>
<dd><code>matrix</code>, LISA statistics for different predictors</dd> <dt><code>weights</code>:</dt>
<dd><code>numeric</code>, the variable importance</dd> <dt><code>statistic</code>:</dt>
<dd><code>character</code>, the name of LISA statistic</dd> <dt><code>LISA</code>:</dt>
<dd><code>numeric</code>, aggregated LISAs at each species location</dd> 
</dl>

Slots

Babak Naimi <a href="/link/naimi.b%40gmail.com?package=usdm&version=2.1-7" data-mini-rdoc="usdm::naimi.b@gmail.com">naimi.b@gmail.com</a>
<a href="https://r-gis.net/">https://r-gis.net/</a>
<a href="https://www.biogeoinformatics.org/">https://www.biogeoinformatics.org/</a>

Author

An object of the <code>speciesLISA</code> class contains information about a local indicator of spatial association (LISA) statistic in predictor variables at the location of species occurrences. The object can be created with the function: <code>speciesLisa</code>.

speciesLISA class — speciesLISA-class

Slots for speciesLISA object:<dl>
 <dt><code>species</code>:</dt>
<dd>object of class <code>SpatialPoints</code></dd>
 
 <dt><code>data</code>:</dt>
<dd><code>data.frame</code>, attribute table of species points</dd>

 <dt><code>LISAs</code>:</dt>
<dd><code>matrix</code>, LISA statistics for different predictors</dd>

 <dt><code>weights</code>:</dt>
<dd><code>numeric</code>, the variable importance</dd>

 <dt><code>statistic</code>:</dt>
<dd><code>character</code>, the name of LISA statistic</dd>

 <dt><code>LISA</code>:</dt>
<dd><code>numeric</code>, aggregated LISAs at each species location</dd>

 
</dl>

Babak Naimi <a href='mailto:naimi.b@gmail.com'>naimi.b@gmail.com</a>
<a href='https://r-gis.net/'>https://r-gis.net/</a>
<a href='https://www.biogeoinformatics.org/'>https://www.biogeoinformatics.org/</a>

speciesLISA-class: speciesLISA class

Description

Arguments

Slots

Author

Examples