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vacem (version 0.1-1)

Vaccination Activities Coverage Estimation Model

Description

A likelihood framework for estimating the effective coverage of vaccination programs using cross-sectional surveys combined with administrative data.

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Version

Install

install.packages('vacem')

Monthly Downloads

1

Version

0.1-1

License

GPL (>= 2)

Maintainer

Ken Cline

Last Published

January 31st, 2012

Functions in vacem (0.1-1)

z.matrix

Creates an eligibility matrix, i...
ll.coverage.optim.const.post.9m

Log likelihood for using optim.
nine.month.pointmass

Defines a simple cumulative distribution function (CDF) with...
vacem-package

Vaccination Activities Coverage Estimation Model
mcmc.estimate

Quick and dirty roll your own MCMC for determining the CI for rho...
get.prob.vacc

Calculates the vaccination probability for all individuals in a group...
mcmc.converge

Function to assess MCMC convergance of a chain given a matrix of MCMC...
get.E.vacc

Calculates the expected number of vaccinations for all individuals...
logistic

Defines a simple logistic function, @f$ e^x / (1 + e^x) @f$.
E.vacc

Calculates the expected number of vaccinations for individuals.
DAYS.PER.MONTH

The average number of days per month.
ll.coverage

Gets the log likelihood of a set of observations.
make.sample.pop

Generates a sample survey population with ages uniformly distributed...
ll.coverage.optim

Log likelihood for using optim.
g

Calculates the vaccination probability for individuals.
calc.camp.coverage

Calculate the expected coverage of each campaign given...
vaccinate.sample.pop

Vaccinates a sample population based on probabilities generated from the...
constant.post.9mo

Defines a simple cumulative distribution function (CDF) with...
w.matrix

Creates a weight matrix from (1) immunization information for a set...
sim.n.vacc.sample.pop

Calculates the number of vaccinations each member of a sample population...