vacem (version 0.1-1)

mcmc.estimate: Quick and dirty roll your own MCMC for determining the CI for rho...

Description

Quick and dirty roll your own MCMC for determining the CI for rho and alpha.

Usage

mcmc.estimate(obs, campaigns, keep.from=1, n.iter=1000, n.chains=5, trans.rho.start=0.5, alpha.start=0, trans.rho.sd=0.1, alpha.sd=0.1, routine.cdf="9m.pointmass", routine.par.start=c(), routine.par.sd=rep(0.1, length(routine.par.start)), z, plot.as.go=FALSE, plot.freq=10)

Arguments

obs

the number of observations

campaigns

TBD

keep.from

TBD

n.iter

the number of interations to do

n.chains

the number of chains to run

trans.rho.start

starting point for rho

alpha.start

starting point for alpha

trans.rho.sd

standard deviation to use for proposal rhos

alpha.sd

standard deviation to us for proposal alphas

routine.cdf

TBD

routine.par.start

TBD

routine.par.sd

TBD

z

TBD

plot.as.go

TBD

plot.freq

TBD

Value