whitening (version 1.4.0)

Whitening and High-Dimensional Canonical Correlation Analysis

Description

Implements the whitening methods (ZCA, PCA, Cholesky, ZCA-cor, and PCA-cor) discussed in Kessy, Lewin, and Strimmer (2018) "Optimal whitening and decorrelation", , as well as the whitening approach to canonical correlation analysis allowing negative canonical correlations described in Jendoubi and Strimmer (2019) "A whitening approach to probabilistic canonical correlation analysis for omics data integration", . The package also offers functions to simulate random orthogonal matrices, compute (correlation) loadings and explained variation. It also contains four example data sets (extended UCI wine data, TCGA LUSC data, nutrimouse data, extended pitprops data).

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Install

install.packages('whitening')

Monthly Downloads

394

Version

1.4.0

License

GPL (>= 3)

Last Published

June 7th, 2022

Functions in whitening (1.4.0)