Frederik Aust

Frederik Aust

8 packages on CRAN

1 packages on GitHub

citr

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Functions and an 'RStudio' add-in that search 'Bib(La)TeX'-files or 'Zotero' libraries (via the 'Better BibTeX' plugin) to insert formatted Markdown citations into the current document.

prereg

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Provides a collection of templates to author preregistration documents for scientific studies in PDF format.

rmdfiltr

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A collection of 'Lua' filters that extend the functionality of R Markdown templates (e.g., count words or post-process 'pandoc-citeproc'- citations).

papaja

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papaja (Preparing APA Journal Articles) provides document formats and helper functions to produce complete APA manuscripts from R Markdown-files (PDF and Word documents).

afex

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Convenience functions for analyzing factorial experiments using ANOVA or mixed models. aov_ez(), aov_car(), and aov_4() allow specification of between, within (i.e., repeated-measures), or mixed (i.e., split-plot) ANOVAs for data in long format (i.e., one observation per row), automatically aggregating multiple observations per individual and cell of the design. mixed() fits mixed models using lme4::lmer() and computes p-values for all fixed effects using either Kenward-Roger or Satterthwaite approximation for degrees of freedom (LMM only), parametric bootstrap (LMMs and GLMMs), or likelihood ratio tests (LMMs and GLMMs). afex_plot() provides a high-level interface for interaction or one-way plots using ggplot2, combining raw data and model estimates. afex uses type 3 sums of squares as default (imitating commercial statistical software).

ggeffects

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Compute marginal effects from statistical models and returns the result as tidy data frames. These data frames are ready to use with the 'ggplot2'-package. Marginal effects can be calculated for many different models. Interaction terms, splines and polynomial terms are also supported. The main functions are ggpredict(), ggemmeans() and ggeffect(). There is a generic plot()-method to plot the results using 'ggplot2'.

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Statistical or cognitive modeling usually requires a number of more or less arbitrary choices creating one specific path through a 'garden of forking paths'. The multiverse approach (Steegen, Tuerlinckx, Gelman, & Vanpaemel, 2016, <doi:10.1177/1745691616658637>) offers a principled alternative in which results for all possible combinations of reasonable modeling choices are reported. MPTmultiverse performs a multiverse analysis for multinomial processing tree (MPT, Riefer & Batchelder, 1988, <doi:10.1037/0033-295X.95.3.318>) models combining maximum-likelihood/frequentist and Bayesian estimation approaches with different levels of pooling (i.e., data aggregation). For the frequentist approaches, no pooling (with and without parametric or nonparametric bootstrap) and complete pooling are implemented using MPTinR <https://cran.r-project.org/package=MPTinR>. For the Bayesian approaches, no pooling, complete pooling, and three different variants of partial pooling are implemented using TreeBUGS <https://cran.r-project.org/package=TreeBUGS>. The main function is fit_mpt() who performs the multiverse analysis in one call.

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Using 'Digital Object Identifiers', check for retracted (or otherwise updated) articles using 'Open Retractions' <http://openretractions.com>.

rmarkdown

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Convert R Markdown documents into a variety of formats.