detrended_img

The detrended image series. A 3-dimensional array of non-negative
integers.

The method used. One of <code>"boxcar"</code>, <code>"exponential"</code> or
<code>"polynomial"</code>.

method

A number. The detrend parameter used.

parameter

Logical. Was automatic detrending used? This is <code>NA</code> if the
detrending parameter is <code>NA</code>.

auto

A <a rd-options="" href="/link/detrended_img?package=detrendr&version=0.1.0" data-mini-rdoc="detrendr::detrended_img">detrended_img</a> is a 3-dimensional array of integers which is the result of
a detrending routine. It has 3 attributes:<dl class="dl-horizontal">
 <dt><code>parameter</code></dt><dd>The value of the parameter used. This
will be the <code>l</code>, <code>tau</code> or <code>degree</code> parameter for the respective methods.</dd>
<dt><code>auto</code></dt><dd>A boolean that is <code>TRUE</code> if the parameter was found
automatically or <code>FALSE</code> if it was manually selected.</dd></dl>

Image series affected by bleaching must be corrected by
'detrending' prior to the performance of quantitative analysis.
'detrendr' is for correctly detrending images. It uses Nolan's algorithm
(Nolan et al., 2017 <doi:10.1093/bioinformatics/btx434>).

Rory Nolan

detrendr

Detrend Images

Sergi Padilla-Parra

detrended_img function

A <a rd-options='' href='detrended_img'>detrended_img</a> is a 3-dimensional array of integers which is the result of
a detrending routine. It has 3 attributes:<dl class='dl-horizontal'>
 <dt><code>parameter</code></dt><dd>The value of the parameter used. This
will be the <code>l</code>, <code>tau</code> or <code>degree</code> parameter for the respective methods.</dd>
<dt><code>auto</code></dt><dd>A boolean that is <code>TRUE</code> if the parameter was found
automatically or <code>FALSE</code> if it was manually selected.</dd></dl>

detrended_img: Detrended image class.

Description

Usage

Arguments

Value