MultiSV: an R package for identification of structural
variations in multiple populations based on whole genome
resequencing
Description
MultiSV is an R package for identification of structural
variations in multiple populations based on whole genome resequencing. It
fits linear mixed model and identifies structural variations in multiple
populations using whole genome sequencing data. It could also be
manipulated to use on RNA-seq data for differential gene expression
(implementation in future releases). Main steps for analysis include
generating read depth in bins using ComputeBinCounts. conversion of bins to
MultiSV format using Bin2MultiSV. Finally, identification of structural
variations using CallMultiSV.