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RiboProfiling (version 1.0.0)
Ribosome Profiling Data Analysis: from BAM to Data
Representation and Interpretation
Description
Starting with a BAM file, this package provides the
necessary functions for quality assessment, read start position
recalibration, the counting of reads on CDS, 3'UTR, and 5'UTR,
plotting of count data: pairs, log fold-change, codon frequency
and coverage assessment, principal component analysis on codon
coverage.