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VIGoR (version 1.0)

Variational Bayesian Inference for Genome-Wide Regression

Description

Conducts linear regression using variational Bayesian inference, particularly optimized for genome-wide association mapping and whole-genome prediction which use a number of DNA markers as the explanatory variables. Provides seven regression models which select the important variables (i.e., the variables related to response variables) among the given explanatory variables in different ways (i.e., model structures).

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Version

Install

install.packages('VIGoR')

Monthly Downloads

203

Version

1.0

License

MIT + file LICENSE

Maintainer

Akio Onogi

Last Published

May 20th, 2015

Functions in VIGoR (1.0)

Covariates

An example of Covariate objects
hyperpara

Calculation of hyperparameter values
vigor

Variational Bayesian inference for genome-wide regression
Pheno

An example of Pheno objects
Geno

An example of marker genotype objects