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biocViews (version 1.36.2)

Categorized views of R package repositories

Description

structures for vocabularies and narratives of views

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Version

Version

1.36.2

License

Artistic-2.0

Maintainer

Bioconductor Package Maintainer

Last Published

February 15th, 2017

Functions in biocViews (1.36.2)

getBiocViews

Build a list of BiocView objects from a package repository
RepositoryDetail-class

Class "RepositoryDetail"
validate_bioc_views

Validate a package's biocViews.
extractVignettes

Extract pdf vignettes from local package repository
genReposControlFiles

Generate CRAN-style repository control files
Htmlized-class

Class "Htmlized"
htmlValue

HTML Representation of an Object
writeHtmlDoc

Write an XML DOM containing HTML to a file
writePackageDetailHtml

Write HTML files for packages in a CRAN-style repository
getBiocSubViews

Build a list of BiocView objects from a package repository
PackageDetail-class

Class "PackageDetail"
recommendBiocViews

Recommend biocViews for an existing Package.
getCurrentbiocViews

Get a list of biocViews for each branch
getPackageNEWS

Retrieve and print package NEWS
BiocView-class

Class "BiocView"
write_VIEWS

Write a VIEWS control file for a CRAN-style package repository
biocViews-package

Categorized views of R package repositories
writeBiocViews

Write a list of BiocView objects to HTML
writeTopLevelView

Write the view for the root of a vocabulary to disk
extractTopLevelFiles

Extract files from the top level of source package tarballs
extractNEWS

Extract NEWS files from source package tarballs
htmlFilename

Return a filename for an object's HTML representation
htmlDoc

Create a complete HTML document representation of an object
writeRepositoryHtml

Write package descriptions and a repository index as HTML
writeRFilesFromVignettes

Write R files from vignettes
biocViewsVocab

Bioconductor Task Views Vocabulary Data
getPacksAndViews

Parse VIEWS file for views and packages
extractManuals

Extract Rd man pages and build pdf reference manuals from local package repository
getSubTerms

Retrieve a term and its children from a vocab DAG
write_REPOSITORY

Write a REPOSITORY control file for a CRAN-style package repository
write_SYMBOLS

Write a SYMBOLS file