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catnet (version 1.00.0)

catnet: Categorical Bayesian Network Inference

Description

A package that handles discrete Bayesian network models and provides inference using the frequentist approach

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Version

Install

install.packages('catnet')

Monthly Downloads

81

Version

1.00.0

License

GPL (>= 2)

Maintainer

Nikolay Balov Peter Salzman psalzmanbstrochesteredu

Last Published

March 8th, 2010

Functions in catnet (1.00.0)

CPDAG-class

Class CPDAG
catNetworkEvaluate-class

Class "catNetworkEvaluate"
cnFind-method

Find Network by Complexity
as.graph-methods

Graph from catNetwork
cnNodes-method

Netwok Nodes
catNetwork-class

Class "catNetwork"
isDAG

Check Direct Acyclic Graph (DAG) Condition
cnEvaluate-method

Network Evaluation from Data
cnFindBIC-method

Find Network by BIC
cnSearchSA

Stochastic Network Search
cnSearchOrder

Network Search for Given Node Order
cnParHist-method

Parenthood Histogram
cnSearchHist

Parent Histogram Matrix
catnet-package

catnet: Categorical Bayesian Network Inference
alarm

The ALARM network
cnCompare-method

Network Comparison
as.igraph-method

catNetwork to igraph
cnNew

New catNetwork
cnFindAIC-method

Find Network by AIC
cnCatnetFromGraph

catNetwork from Graph
breast

Breast cancer data
cnCatnetFromEdges

catNetwork from Edges
cnSetProb-method

Set Probability from Data
cnMatParents-method

Network Parent Matrix
cnOrder-method

Network Node Order
novartis

Novartis multi-tissue data
cnComplexity-method

Network Complexity
cnSearchSAcluster

Stochastic Network Search. Parallel Processing.
cnPearsonTest-method

Goodness of Fit Test
cnSamplesPert-method

Perturbed Samples from Network
cnProb-method

Conditional Probability Structure of Network
cnCatnetFromSif

catNetwork from Simple Interaction File (SIF)
cnParents-method

Network Parents
cnMatEdges-method

Network Edge Matrix
cnDiscretize

Data Categorization
catNetworkDistance-class

Class "catNetworkDistance"
cnLoglik-method

Sample Log-likelihood
cnNumNodes-method

Network Size
cnRandomCatnet

Random Network
cnPredict-method

Prediction
dag2cpdag-method

Complete Network Representation
cnEdges-method

Network Edges
cnSamples-method

Samples from Network
cnNodeLoglik

Node Log-likelihood
cnDot-method

Network Description File
cnReorderNodes-method

Reorder Network Nodes
cnPlot-method

Plot Network
cnNodeMarginalProb-method

Node Marginal Probability
cnSubNetwork-method

Sub-Network
cnSearchHistCluster

Parent Histogram Matrix - Parallel Version