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chainbinomial (version 0.1.5)

Chain Binomial Models for Analysis of Infectious Disease Data

Description

Implements the chain binomial model for analysis of infectious disease data. Contains functions for calculating probabilities of the final size of infectious disease outbreaks using the method from D. Ludwig (1975) and for outbreaks that are not concluded, from Lindstrøm et al. (2024) . The package also contains methods for estimation and regression analysis of secondary attack rates.

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Version

Install

install.packages('chainbinomial')

Monthly Downloads

150

Version

0.1.5

License

GPL-3

Maintainer

Jonas Lindstrc3<b8>m

Last Published

May 27th, 2024

Functions in chainbinomial (0.1.5)

estimate_sar

Estimate Secondary Attack Rate of the Chain Binomial Model
vcov.cbmod

Variance-Covariance Matrix of cbmod Object.
summary.cbmod

Summary of cbmod Object.
tidy.cbmod

Tidy a cbmod object
confint.sar

Confidence intervals for sar Object.
confint.cbmod

Confidence intervals for cbmod Object.
glance.cbmod

Glance at a cbmod object
dchainbinom

The Chain Binomial distribution
heasman_reid_1961

Common Cold Data
predict.cbmod

Predict Method for cbmod Fits
coef.cbmod

Extract Model Coefficient for cbmod Fits
cbmod

Fitting models for Secondary Attack Rate with Chain Binomial response
reexports

Objects exported from other packages