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flowFP (version 1.30.0)

Fingerprinting for Flow Cytometry

Description

Fingerprint generation of flow cytometry data, used to facilitate the application of machine learning and datamining tools for flow cytometry.

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Version

Version

1.30.0

License

Artistic-2.0

Maintainer

Herb Holyst

Last Published

February 15th, 2017

Functions in flowFP (1.30.0)

flowFPModel-class

Fingerprint model class description.
is.flowFPPlex

Test to see if object is a flowFPPlex
hasClasses-methods

Returns TRUE if the flowFP has a class factor for its instances
is.flowFP

Test to see if object is a flowFP
nRecursions-methods

Methods to set or get nRecursions
plate

96 well plate data.
sampleNames-methods

Methods to return sample names from a flowFP object.
flowFP-package

Package overview
counts-methods

Method for getting fingerprint data.
plot-methods

Methods for visualizing flowFP objects
nFeatures-methods

Returns the number of features in an object.
flowFPPlex

Fingerprint collection constructor.
append-methods

Methods to append flowFP fingerprints to a flowFPPlex
binBoundary-methods

Return bin boundaries for a flowFPModel
summary-methods

Summerizes a flowFP object.
nInstances-methods

Returns the number of instances in an object.
flowFP

Fingerprint constructor
is.flowFPModel

Test to see if object is a flowFPModel
tags-methods

Returns tags from a flowFP object.
length-methods

The number of fingerprints in a flowFPPlex
fs1

Example FCS flowSet
flowFP-class

Fingerprint class description.
[-methods

Indexing methods for flowFP and flowFPPlex
sampleClasses-methods

Gets/Sets the sample classes for a fingerprint.
flowFPModel

Fingerprint model constructor
fs2

Example FCS flowSet
parameters-methods

Return the parameters considered for fingerprinting
show-methods

Methods to view flowFP objects
flowFPPlex-class

Fingerprint collection class description.
name-methods

Get Model Name