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openCR (version 2.2.6)
Open Population Capture-Recapture
Description
Non-spatial and spatial open-population capture-recapture analysis.
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Version
2.2.6
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Install
install.packages('openCR')
Monthly Downloads
617
Version
2.2.6
License
GPL (>= 2)
Issues
7
Pull Requests
0
Stars
4
Forks
1
Repository
https://github.com/MurrayEfford/openCR/
Homepage
https://www.otago.ac.nz/density/
Maintainer
Murray Efford
Last Published
November 28th, 2023
Functions in openCR (2.2.6)
Search all functions
gonodontisCH
Gonodontis Moths
modelAverage
Averaging of OpenCR Models Using Akaike's Information Criterion
dipperCH
Dippers
make.kernel
Discrete Movement Kernel
Microtus
Patuxent Meadow Voles
make.table
Tabulate Estimates From Multiple Models
Internal
Internal Functions
openCR-package
Open Population Capture--Recapture Models
openCR-defunct
Defunct Functions in Package
openCR
Movement models
List of Movement Models
moving.fit
Moving Window Functions
openCR.design
Design Data for Open population Models
openCR.fit
Fit Open Population Capture--Recapture Model
makeNewData
Create Default Design Data
openCRlist
Bundle openCR Models
openCR-deprecated
Deprecated Functions in Package
openCR
rev.capthist
Reverse Primary Sessions
plot.derivedopenCR
Plot Derived Estimates
pkernel
Kernel Distribution Functions
predict.openCR
openCR Model Predictions
print.derivedopenCR
Print Method for Derived Estimates
read.inp
Import Data from RMark Input Format
par.openCR.fit
Fit Multiple openCR Models
print.openCR
Print or Summarise openCR Object
stratify
Stratify Capture-Recapture Data
squeeze
Unique Capture Histories
strata
Stratum names
JS.counts
Summarise Non-spatial Open-population Data
plot.openCR
Plot Estimates
simulation
Simulate Capture Histories
ucare.cjs
Goodness-of-fit tests for the Cormack-Jolly-Seber model
LLsurface
Plot Likelihood Surface
derived
Derived Parameters From openCR Models
collate
Array of Parameter Estimates
cumMove
Probability Distribution After Movement
JS.direct
Jolly--Seber Estimates
expected.d
Expected Distance Moved
matchscale
Match Kernel
age.matrix
Session-specific Ages
Field vole
Kielder Field Voles
PPNpossums
Orongorongo Valley Brushtail Possums
AIC.openCR
Compare openCR Models
cloned.fit
Cloning to Evaluate Identifiability
classMembership
Class Membership Probability for Mixture Models
miscellaneous
Data Manipulation