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shinystan (version 2.0.0)

Interactive Visual and Numerical Diagnostics and Posterior Analysis for for Bayesian Models

Description

We provide a graphical user interface for interactive Markov chain Monte Carlo (MCMC) diagnostics and plots and tables helpful for analyzing a posterior sample. The interface is powered by RStudio's Shiny web application framework and works with the output of MCMC programs written in any programming language (and has extended functionality for Stan models fit using the rstan package and the No-U-Turn sampler).

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Install

install.packages('shinystan')

Monthly Downloads

175,662

Version

2.0.0

License

GPL (>= 3)

Issues

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Maintainer

Jonah Gabry

Last Published

August 10th, 2015

Functions in shinystan (2.0.0)

launch_shinystan

ShinyStan app
retrieve

Get summary statistics from shinystan object
deploy_shinystan

Deploy a ShinyStan app to shinyapps.io
shinystan-package

The ShinyStan interface and shinystan R package
eight_schools

ShinyStan demo: Eight Schools
model_code

Add model code to a shinystan object or see the code currently stored in a shinystan
rename_model

Change the model name associated with a shinystan object
sso_info

Print summary of shinystan object
launch_shinystan_demo

ShinyStan demo
shinystan-class

S4 shinystan objects (sso)
as.shinystan

Create and test shinystan objects
generate_quantity

Add to shinystan object a new parameter as a function of one or two existing parameters
update_sso

Update an object created by an earlier version of shinystan
notes

Additional or replacement notes