taxa (version 0.3.2)

taxon_ranks: Get taxon ranks

Description

Return the taxon ranks in a taxonomy() or taxmap() object. They are in the order taxa appear in the edge list.

obj$taxon_ranks()
taxon_ranks(obj)

Arguments

obj

The taxonomy() or taxmap() object.

See Also

Other taxonomy data functions: classifications, id_classifications, is_branch, is_internode, is_leaf, is_root, is_stem, map_data_, map_data, n_leaves_1, n_leaves, n_subtaxa_1, n_subtaxa, n_supertaxa_1, n_supertaxa, taxon_ids, taxon_indexes, taxon_names

Examples

Run this code
# NOT RUN {
# Get ranks for each taxon
taxon_ranks(ex_taxmap)

# Filter by rank
filter_taxa(ex_taxmap, taxon_ranks == "family", supertaxa = TRUE)

# }

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