Learn R Programming

⚠️There's a newer version (1.7.5) of this package.Take me there.

R genome browser

R package to efficiently browse and handle genomic data.

Availability

A short presentation of the project can be found on my personnal website.

Release sources and builds can be found in the CRAN repository :

Development sources are freely available on GitHub :

All this material is freely distributed under the GNU Public License 3, shipped with sources and builds.

Support

Bugs, suggestions and help requests should be submitted using GitHub's Issues (see 'Availability').

Changelog

Release updates are tracked by the NEWS.Rd file, browsable on the CRAN repository (see 'Availability').

Individual commits can be followed on GitHub (see 'Availability').

Credits

Sylvain Mareschal <maressyl@gmail.com>

Copy Link

Version

Install

install.packages('Rgb')

Monthly Downloads

40

Version

1.5.1

License

GPL (>= 3)

Maintainer

Sylvain Mareschal

Last Published

April 21st, 2017

Functions in Rgb (1.5.1)

draw.points

draw.seq

refTable-class

Class
refTable-constructor

Annotation

crossable-class

Class
RDT storage files

segMerge

tk.utils

findDrawables

segOverlap

singlePlot

track.genes-class

Class
hsFeatures

Homo sapiens GRCh37 genomic features
track-constructors

yline

track.table-class

Class
tk.convert

tk.tracks

track.fasta-class

Class
track.fasta-constructors

draw.steps

drawable-class

Class
subtrack

read.gtf

track.bands-class

Class
track.exons-class

Class
draw.hist

draw.pileup

drawable.list-class

Class
drawable.list

track.CNV-class

Class
track.bam-class

Class
sliceable-class

Class
tk.browse

draw.bg

draw.boxes